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Malaysian Oil Palm Genome Programme (MyOPGP)
Malaysia MPIC MPOB

Genome statistics

The oil palm genome was assembled using Newbler 454 technology. Below are the statistics for the Pisifera genome build-5 (P5)

Total number of scaffolds 40,360
Total number of sequences 618,218
Scaffold average / N50 / largest (bp) 38,036 / 1,045,414 / 22,100,610
Total number of assembled reads 145,089,284 (78.4%)
Assembled: 138,823,335
Partial: 6,265,949
Total number of unassembled reads 39,861,390 (21.5%)
Singleton: 2,251,739
Repeat: 36,135,239
Outlier: 1,474,412
Number of bases 1,535,150,282 bp

Pie chart for assembled (P5) oil palm genome sequences

  • Unassembled (17%)
  • P5-build (83%)

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  Statistic